knncolle
Collection of KNN methods in C++
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knncolle::Searcher< Index_, Float_ > Class Template Referenceabstract

Interface for searching nearest-neighbor search indices. More...

#include <Searcher.hpp>

Inheritance diagram for knncolle::Searcher< Index_, Float_ >:
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Public Member Functions

virtual void search (Index_ i, Index_ k, std::vector< Index_ > *output_indices, std::vector< Float_ > *output_distances)=0
 
virtual void search (const Float_ *query, Index_ k, std::vector< Index_ > *output_indices, std::vector< Float_ > *output_distances)=0
 
virtual bool can_search_all () const
 
virtual Index_ search_all (Index_ i, Float_ distance, std::vector< Index_ > *output_indices, std::vector< Float_ > *output_distances)
 
virtual Index_ search_all (const Float_ *query, Float_ distance, std::vector< Index_ > *output_indices, std::vector< Float_ > *output_distances)
 

Detailed Description

template<typename Index_, typename Float_>
class knncolle::Searcher< Index_, Float_ >

Interface for searching nearest-neighbor search indices.

Instances of Searcher subclasses are typically constructed with Prebuilt::initialize(). This is intended to allow re-use of data allocations across different calls to search(). Users should ensure that a Searcher instance does not outlive the Prebuilt object used to generate it; this allows developers of the former to hold references to the latter.

Template Parameters
Index_Integer type for the indices. For the output of Builder::build, this is set to MockMatrix::index_type.
Float_Floating point type for the query data and output distances.

Member Function Documentation

◆ can_search_all()

virtual bool knncolle::Searcher< Index_, Float_ >::can_search_all ( ) const
inlinevirtual

It is expected that the return value of this method should be constant throughout the lifetime of any Searcher instance.

Returns
Whether this instance has an implementation of the search_all() method.

Reimplemented in knncolle::BruteforceSearcher< Distance_, Dim_, Index_, Store_, Float_ >, knncolle::KmknnSearcher< Distance_, Dim_, Index_, Store_, Float_ >, and knncolle::VptreeSearcher< Distance_, Dim_, Index_, Store_, Float_ >.

◆ search() [1/2]

virtual void knncolle::Searcher< Index_, Float_ >::search ( const Float_ query,
Index_  k,
std::vector< Index_ > *  output_indices,
std::vector< Float_ > *  output_distances 
)
pure virtual

Find the nearest neighbors of a new observation.

Parameters
queryPointer to an array of length equal to Prebuilt::num_dimensions(), containing the coordinates of the query point.
kThe number of neighbors to identify. This should be a non-negative integer.
[out]output_indicesPointer to a vector, to be filled with the identities of the nearest neighbors in order of increasing distance. Length of the vector on output is no more than k, but may be shorter if the total number of observations is less than k + 1. Optionally NULL, in which case no indices are returned.
[out]output_distancesPointer to a vector, to be filled with the distances of the nearest neighbors. This corresponds to the indices reported in output_indices. Optionally NULL, in which case no distances are returned.

Implemented in knncolle::BruteforceSearcher< Distance_, Dim_, Index_, Store_, Float_ >, knncolle::KmknnSearcher< Distance_, Dim_, Index_, Store_, Float_ >, and knncolle::VptreeSearcher< Distance_, Dim_, Index_, Store_, Float_ >.

◆ search() [2/2]

virtual void knncolle::Searcher< Index_, Float_ >::search ( Index_  i,
Index_  k,
std::vector< Index_ > *  output_indices,
std::vector< Float_ > *  output_distances 
)
pure virtual

Find the nearest neighbors of the i-th observation in the dataset.

Parameters
iThe index of the observation of interest. This should be non-negative and less than the total number of observations in Prebuilt::num_observations().
kThe number of neighbors to identify. This should be a non-negative integer.
[out]output_indicesPointer to a vector, to be filled with the identities of the nearest neighbors in order of increasing distance. Length of the vector on output is no more than k, but may be shorter if the total number of observations is less than k + 1. This vector is guaranteed to not contain i itself. Optionally NULL, in which case no indices are returned.
[out]output_distancesPointer to a vector, to be filled with the distances of the nearest neighbors. This corresponds to the indices reported in output_indices. Optionally NULL, in which case no distances are returned.

Implemented in knncolle::BruteforceSearcher< Distance_, Dim_, Index_, Store_, Float_ >, knncolle::KmknnSearcher< Distance_, Dim_, Index_, Store_, Float_ >, and knncolle::VptreeSearcher< Distance_, Dim_, Index_, Store_, Float_ >.

◆ search_all() [1/2]

template<typename Index_ , typename Float_ >
virtual Index_ knncolle::Searcher< Index_, Float_ >::search_all ( const Float_ *  query,
Float_  distance,
std::vector< Index_ > *  output_indices,
std::vector< Float_ > *  output_distances 
)
inlinevirtual

Find all neighbors of a new observation within a certain distance. This method is optional and may not be implemented by subclasses, so applications should check can_search_all() before attempting a call. A run-time exception is thrown if this method is called on a subclass that does not implement it.

Parameters
queryPointer to an array of length equal to Prebuilt::num_dimensions(), containing the coordinates of the query point.
distanceThe distance in which to consider neighbors.
[out]output_indicesPointer to a vector, to be filled with the identities of the nearest neighbors in order of increasing distance. Optionally NULL, in which case no indices are returned.
[out]output_distancesPointer to a vector, to be filled with the distances of the nearest neighbors. This corresponds to the indices reported in output_indices. Optionally NULL, in which case no distances are returned.
Returns
Number of neighbors within distance of query.

Reimplemented in knncolle::BruteforceSearcher< Distance_, Dim_, Index_, Store_, Float_ >, knncolle::KmknnSearcher< Distance_, Dim_, Index_, Store_, Float_ >, and knncolle::VptreeSearcher< Distance_, Dim_, Index_, Store_, Float_ >.

◆ search_all() [2/2]

template<typename Index_ , typename Float_ >
virtual Index_ knncolle::Searcher< Index_, Float_ >::search_all ( Index_  i,
Float_  distance,
std::vector< Index_ > *  output_indices,
std::vector< Float_ > *  output_distances 
)
inlinevirtual

Find all neighbors of the i-th observation within a certain distance. This method is optional and may not be implemented by subclasses, so applications should check can_search_all() before attempting a call. A run-time exception is thrown if this method is called on a subclass that does not implement it.

Parameters
iThe index of the observation of interest. This should be non-negative and less than the total number of observations in Prebuilt::num_observations().
distanceThe distance in which to consider neighbors.
[out]output_indicesPointer to a vector, to be filled with the identities of the nearest neighbors in order of increasing distance. This vector is guaranteed to not contain i itself. Optionally NULL, in which case no indices are returned.
[out]output_distancesPointer to a vector, to be filled with the distances of the nearest neighbors. This corresponds to the indices reported in output_indices. Optionally NULL, in which case no distances are returned.
Returns
Number of neighbors within distance of i.

Reimplemented in knncolle::BruteforceSearcher< Distance_, Dim_, Index_, Store_, Float_ >, knncolle::KmknnSearcher< Distance_, Dim_, Index_, Store_, Float_ >, and knncolle::VptreeSearcher< Distance_, Dim_, Index_, Store_, Float_ >.


The documentation for this class was generated from the following file: